Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015806586.1_cds_XP_016494413.1_8825
CDS Infomation

[gene=LOC107813646] [db_xref=GeneID:107813646] [protein=serine/threonine-protein kinase Nek6-like isoform X2] [protein_id=XP_016494413.1] [location=complement(join(6653..7552,7648..7699,7794..7867,7955..8004,8217..8298,9085..9134,9224..9266,9428..9508,9669..9714,9805..9851,9966..10031))] [gbkey=CDS]
Sequence

ATGAATTTGATAGCCAAGCTAGATAATCCTTATATTGTAGAATACAAGGATGCATGGGTA
GAGAAGGACTCTTTTGTCTGCATTGTGACAAGTTACTGTGAAGGTGGAGACATGGCTGAA
ATTATTAGAAAAGCCAGAGGAATTTTTTTCCCTGAAGAGAGACTTTGCAAATGGTTGACT
CAGTTGTTGCTGGCTCTTGATTACCTTCACTCCAATCGTGTTCTTCACAGAGATCTTAAA
TGCTCTAACATTTTCCTTACCAAAGACGACGAAATCAGACTCGGTGATTTTGGATTAGCC
AAATTGCTGAATAAAGATGACCTTGCCTCTTCGATTGTGGGAACTCCAACATATATGTGC
CCTGAGCTCCTAGCAGATATACCCTATGGATACAAATCAGACATATGGTCTCTAGGTTGT
TGTATGTTTGAAATTGCTGCTCATATGCTTGCATTTCGAGCTCTGGATATGCCTGGACTG
ATCAACAAAATAAACAGATCCACTGTCTCTCCACTTCCAACCATATATTCCTCCACATTG
AAACGATTGATCAAAAGCATGCTAAGAAAAAGCCCCGAGCACAGACCTACGGCTGCAGAG
TTGTTGAGGCATCCACATTTACAACCATACCTTGCTAAATGCCGGAATTTGCCACCAGCG
TTTGTATCAGTAGTTTCTAACAAAGAAGCAAAACATAGTAATGAGTCAACTTCCAAGCCT
ACATTAGGAAAAGACCAAAGGCTTCTGAAGGAAATTAGACAAGCCAAAAAACAAGACAAG
GTTGCTGCAGTTGATGGAAATGTTCATGAACTCAAAGGCGAATCGCCTAATACATGTAAA
ATCAAAAAAATTAACCTTCAGAGCATGAAAGTAGAAAATCCGGAGAATGAAAGATTCCAA
AGCATATCCGTCAAGAAAAGTGGAAGTACTAATTCAAGAAGCTCCACAAGAAGTACTTTG
ACTGATCAACATGAAGCTGATACGAAAGAATTCTTAGCGGAGACTTATAACATAATTGAG
GGAACAGATCAAGAAAAGCATAAACCAACCGATCATAGGCCTATTGAGAGCAAGAAAGAC
GCAAAATCTCAACCAGAAGAGCAAAAAAAATGCACATTGAAGAAACCAGGAATACCAAAA
CCATATAATGAAGTTGCAGCAAAAGCCATTGATCATCTAAGTACTAATCGGGATACAGAA
AAACACGATGGTCATAAACGTGCAGCGAGTGAGACGTCAGTAATGGCTACACTGAATTTG
TTACAAGGGAAGAACAATGTGGGAATTAGTATGAGCAATGAAAGGGCAGAAGCACTAGAG
TCATTACTTGAATTTTGTGCAGAGTTACTTAAGCATGAAAAGATAGAAGAATTAGCTGGT
GTGCTGAAACCATTTGGGGAAGAAGCTGTTTCTTCTAGAGAAACAGCAATTTGGTTGACT
AAAGGACTAATGAATCTTCAAAACCAAGGTGAGGAAACTGAGAGTGCATAG

Peptide Sequence

PEP ID

XP_016494413.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase Nek6-like isoform X2 [Nicotiana tabacum]
Sequence

MNLIAKLDNPYIVEYKDAWVEKDSFVCIVTSYCEGGDMAEIIRKARGIFFPEERLCKWLT
QLLLALDYLHSNRVLHRDLKCSNIFLTKDDEIRLGDFGLAKLLNKDDLASSIVGTPTYMC
PELLADIPYGYKSDIWSLGCCMFEIAAHMLAFRALDMPGLINKINRSTVSPLPTIYSSTL
KRLIKSMLRKSPEHRPTAAELLRHPHLQPYLAKCRNLPPAFVSVVSNKEAKHSNESTSKP
TLGKDQRLLKEIRQAKKQDKVAAVDGNVHELKGESPNTCKIKKINLQSMKVENPENERFQ
SISVKKSGSTNSRSSTRSTLTDQHEADTKEFLAETYNIIEGTDQEKHKPTDHRPIESKKD
AKSQPEEQKKCTLKKPGIPKPYNEVAAKAIDHLSTNRDTEKHDGHKRAASETSVMATLNL
LQGKNNVGISMSNERAEALESLLEFCAELLKHEKIEELAGVLKPFGEEAVSSRETAIWLT
KGLMNLQNQGEETESA

Transcript Sequence

Gene sequence data has not been registered.